The Integrative Modeling Platform
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Updated
Jul 16, 2024 - C++
The Integrative Modeling Platform
Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic balls.
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Fast protein structure searching or your money back
Augmented Reality object for biochemistry
SaprotHub: Making Protein Modeling Accessible to All Biologists
Fusion of sequence, structure and feature information to improve protein solubility prediction.
Optimizing AlphaFold Training and Inference on GPU Clusters
Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.
Protein Graph Library
Foldseek enables fast and sensitive comparisons of large structure sets.
Molecular simulation in Julia
A Julia package to read, write and manipulate macromolecular structures
DiffModeler: a diffusion model based protein complex structure modeling tool.
Ramachandran plotting tool
Making Protein folding accessible to all!
xTrimoPGLM: Unified 100B-Scale Pre-trained Transformer for Deciphering the Language of Protein
Python Modeling Interface
mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data
MIToS is a Julia package to analyze protein sequences, structures, and evolutionary information
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