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@CNIC-Proteomics

Proteomics at the Spanish National Center of Cardiovascular Research

Repository of tools developed by the Jesús Vázquez lab

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  1. Comet-PTM Comet-PTM Public

    Comet-PTM, branch of Comet MS/MS

    Objective-C 4 3

  2. iSanXoT iSanXoT Public

    Stand-alone application that executes workflows for quantitative high-throughput proteomics, systems biology and the statistical analysis, integration and comparison of experiments, based on SanXoT…

    Python 1 1

  3. TurboOmics TurboOmics Public

    Next.js application for Proteomics and Metabolomics integration implemented in TurboPutative

    JavaScript 1 1

Repositories

Showing 10 of 55 repositories
  • nf-SearchEngine Public
    CNIC-Proteomics/nf-SearchEngine’s past year of commit activity
    Groovy 0 0 0 0 Updated Jul 16, 2024
  • nf-modules Public

    Modules for nextflow pipelines

    CNIC-Proteomics/nf-modules’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jul 16, 2024
  • nf-PTM-compass Public

    PTM-compass workflow

    CNIC-Proteomics/nf-PTM-compass’s past year of commit activity
    Groovy 0 0 0 0 Updated Jul 16, 2024
  • next-Launcher Public

    Core for the next-Launcher: backend and frontend systems

    CNIC-Proteomics/next-Launcher’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Jul 15, 2024
  • next-Launcher-app Public

    Web application for the next-Launcher system

    CNIC-Proteomics/next-Launcher-app’s past year of commit activity
    JavaScript 0 0 0 0 Updated Jul 15, 2024
  • SHIFTS Public

    SHIFTS is a battery of programs for high-throughput PTM (Post Translational Modifications) processing. SHIFTS identifies peaks in the Delta Mass distribution, assigns PSMs to peaks, and calculates FDR for peptide identification.

    CNIC-Proteomics/SHIFTS’s past year of commit activity
    Python 0 3 0 0 Updated Jul 15, 2024
  • nextflow-api Public

    Nextflow-API is a web application and REST API for submitting and monitoring Nextflow pipelines on a variety of execution environments.

    CNIC-Proteomics/nextflow-api’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jul 12, 2024
  • TurboPutative-web Public
    CNIC-Proteomics/TurboPutative-web’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 11, 2024
  • TurboOmics Public

    Next.js application for Proteomics and Metabolomics integration implemented in TurboPutative

    CNIC-Proteomics/TurboOmics’s past year of commit activity
    JavaScript 1 1 0 0 Updated Jul 11, 2024
  • bioDataHub Public

    Scripts that create databases used by iSanXoT

    CNIC-Proteomics/bioDataHub’s past year of commit activity
    Python 0 0 0 0 Updated Jul 9, 2024
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