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Handlegraph RDF writers in java for working with variation graph genome data.

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JervenBolleman/handlegraph4jRDF

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Converts a GFA1 file to RDF

Using both the VG and FALDO ontologies it convers a GFA1 Genome Variation Graph into a RDF graph.

To make a fat jar to run the program

mvn package

Then run with

java -jar target/handlegraph4j-rdf-0.1-jar-with-dependencies.jar 

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Handlegraph RDF writers in java for working with variation graph genome data.

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