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Pull requests: broadinstitute/gatk
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Modified HaplotypeBasedVariantRecaller to support non-flow reads
#8896
opened Jun 26, 2024 by
ilyasoifer
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FlowFeatureMapper: X_FILTERED_COUNT semantics adjusted and documented more accurately
#8894
opened Jun 26, 2024 by
dror27
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Extract the revision 1 / "full" filter tables only [VS-1409]
#8868
opened Jun 11, 2024 by
mcovarr
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Add utilites to update Echo filters and reference genotypes
#8867
opened Jun 11, 2024 by
chrisvittal
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Changed flow allele filtering in Mutect2 to work separately on the tumor and the normal samples
#8855
opened Jun 1, 2024 by
ilyasoifer
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vs 1372 excess alt alleles -- set limit to 3 for a test
#8843
opened May 22, 2024 by
RoriCremer
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Retain all source IDs on VariantContext merge + test
#8752
opened Mar 26, 2024 by
lbergelson
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Test out the preview version of the next GKL (DO NOT MERGE)
#8712
opened Mar 4, 2024 by
droazen
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Refactoring a confusing method in GATKVariantContextUtils
#8690
opened Feb 13, 2024 by
lbergelson
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