Skip to content
@cbg-ethz

Computational Biology Group (CBG)

Beerenwinkel Lab at ETH Zurich

Pinned Loading

  1. V-pipe V-pipe Public

    V-pipe is a pipeline designed for analysing NGS data of short viral genomes

    Jupyter Notebook 129 44

Repositories

Showing 10 of 94 repositories
  • scDEF Public

    Deep exponential families for single-cell data.

    cbg-ethz/scDEF’s past year of commit activity
    Python 18 0 0 0 Updated Jul 16, 2024
  • oncotreeVIS Public
    cbg-ethz/oncotreeVIS’s past year of commit activity
    HTML 0 0 0 0 Updated Jul 14, 2024
  • metMHN Public

    This is a adaptation to MHN so that it works on metastasis

    cbg-ethz/metMHN’s past year of commit activity
    Python 4 MIT 2 0 0 Updated Jul 13, 2024
  • SCATrEx Public

    Map single-cell transcriptomes to copy number evolutionary trees.

    cbg-ethz/SCATrEx’s past year of commit activity
    Python 13 1 3 0 Updated Jul 11, 2024
  • BnpC Public

    Bayesian non-parametric clustering (BnpC) of binary data with missing values and uneven error rates

    cbg-ethz/BnpC’s past year of commit activity
    Python 18 MIT 4 8 0 Updated Jul 11, 2024
  • pangolin Public

    BSSE COVID-19 sequencing of test swab samples

    cbg-ethz/pangolin’s past year of commit activity
    Shell 7 3 1 2 Updated Jul 10, 2024
  • mnem Public

    Mixture Nested Effects Models - https://doi.org/10.1093/bioinformatics/bty602 - https://bioconductor.org/packages/mnem

    cbg-ethz/mnem’s past year of commit activity
    R 4 3 0 0 Updated Jul 8, 2024
  • V-pipe Public

    V-pipe is a pipeline designed for analysing NGS data of short viral genomes

    cbg-ethz/V-pipe’s past year of commit activity
    Jupyter Notebook 129 Apache-2.0 44 28 3 Updated Jul 6, 2024
  • LolliPop Public

    Deconvolution for Wastewater Genomics

    cbg-ethz/LolliPop’s past year of commit activity
    Jupyter Notebook 4 GPL-3.0 0 0 0 Updated Jul 6, 2024
  • bmi Public

    Mutual information estimators and benchmark

    cbg-ethz/bmi’s past year of commit activity
    Python 26 MIT 4 16 2 Updated Jun 28, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…