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Computer Technologies Laboratory

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  1. fgsea fgsea Public

    Fast Gene Set Enrichment Analysis

    R 354 65

  2. ITMO_FS ITMO_FS Public

    Feature selection library in python

    Python 142 38

  3. GADMA GADMA Public

    Genetic Algorithm for Demographic Model Analysis

    Python 43 13

  4. phantasus phantasus Public

    Visual exploratory analysis of gene expression data

    HTML 38 15

  5. LinSeed LinSeed Public

    Linseed: LINear Subspace identification for gene Expresion Deconvolution

    R 27 8

  6. metafast metafast Public

    Fast metagenome analysis toolkit

    Java 26 10

Repositories

Showing 10 of 70 repositories
  • mwcsr Public

    An R package for solving maximum-weight connected subrgaph problem and it's variants

    ctlab/mwcsr’s past year of commit activity
    C++ 7 3 0 0 Updated Jul 16, 2024
  • phantasus Public

    Visual exploratory analysis of gene expression data

    ctlab/phantasus’s past year of commit activity
    HTML 38 15 23 1 Updated Jul 11, 2024
  • fgsea Public

    Fast Gene Set Enrichment Analysis

    ctlab/fgsea’s past year of commit activity
    R 354 65 15 0 Updated Jul 11, 2024
  • HiCT Public

    Combines all HiCT-related repositories as submodules

    ctlab/HiCT’s past year of commit activity
    Dockerfile 2 MIT 0 1 0 Updated Jun 26, 2024
  • HiCT_Library Public

    Library for interaction with Hi-C contact maps in HDF5 format

    ctlab/HiCT_Library’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 26, 2024
  • HiCT_JVM Public

    Interactive visualizer ad manual scaffolder of Hi-C contact maps. All-in-one Java-based implementation.

    ctlab/HiCT_JVM’s past year of commit activity
    Java 1 MIT 0 7 0 Updated Jun 26, 2024
  • HiCT_Server Public
    ctlab/HiCT_Server’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jun 26, 2024
  • HiCT_Utils Public

    Utilities for interaction with HiCT library and data format.

    ctlab/HiCT_Utils’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Jun 26, 2024
  • HiCT_WebUI Public
    ctlab/HiCT_WebUI’s past year of commit activity
    TypeScript 0 MIT 0 0 0 Updated Jun 26, 2024
  • GADMA Public

    Genetic Algorithm for Demographic Model Analysis

    ctlab/GADMA’s past year of commit activity
    Python 43 13 7 0 Updated May 30, 2024
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