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reimandlab

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  1. ActivePathways ActivePathways Public

    Integrative pathway enrichment analysis of multivariate omics data

    R 87 22

  2. ActiveDriverDB ActiveDriverDB Public

    ActiveDriverDB

    Python 12 3

  3. ActiveDriverWGSR ActiveDriverWGSR Public

    ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data

    R 4 7

  4. DPM_publication_code DPM_publication_code Public

    DPM: code and input files for the publication

    R 3

  5. lncRNAs_TCGA lncRNAs_TCGA Public

    Code I have used throughout my Masters analyzing TCGA clinical and RNA-Seq datasets to discover lncRNA prognostic markers

    R 2 4

  6. needleplot needleplot Public

    Another needleplot for mutation data, used by ActiveDriverDB

    JavaScript 2 1

Repositories

Showing 10 of 21 repositories
  • ActivePathways Public

    Integrative pathway enrichment analysis of multivariate omics data

    reimandlab/ActivePathways’s past year of commit activity
    R 87 22 0 0 Updated Jun 21, 2024
  • DPM_publication_code Public

    DPM: code and input files for the publication

    reimandlab/DPM_publication_code’s past year of commit activity
    R 3 0 0 0 Updated Jun 20, 2024
  • ActiveDriverWGSR Public

    ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data

    reimandlab/ActiveDriverWGSR’s past year of commit activity
    R 4 7 4 0 Updated Feb 21, 2024
  • reimandlab.github.io Public
    reimandlab/reimandlab.github.io’s past year of commit activity
    Ruby 0 1 0 0 Updated Oct 14, 2023
  • PPI_network_based_gene_type_prediction_model Public

    This is the repository for Reagan (Gen) LI's BCB430 summer project.

    reimandlab/PPI_network_based_gene_type_prediction_model’s past year of commit activity
    R 0 1 0 0 Updated Aug 18, 2023
  • ActiveDriverDB Public

    ActiveDriverDB

    reimandlab/ActiveDriverDB’s past year of commit activity
    Python 12 LGPL-2.1 3 7 3 Updated May 1, 2023
  • RM2 Public

    Regression Models for Localised Mutations

    reimandlab/RM2’s past year of commit activity
    R 0 2 1 0 Updated Aug 11, 2022
  • CA2M_v2 Public

    CA2M: chromatin accessibility and mutations in cancer genomes

    reimandlab/CA2M_v2’s past year of commit activity
    R 2 1 0 0 Updated May 18, 2022
  • ShinyActivePathways Public

    A shiny web server that performs ActivePathways and display results in Enrichment map

    reimandlab/ShinyActivePathways’s past year of commit activity
    R 0 1 0 0 Updated Apr 8, 2022
  • lncRNAs_TCGA Public

    Code I have used throughout my Masters analyzing TCGA clinical and RNA-Seq datasets to discover lncRNA prognostic markers

    reimandlab/lncRNAs_TCGA’s past year of commit activity
    R 2 4 0 0 Updated Sep 9, 2021
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