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Pull requests: scverse/scvi-tools

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Pull requests list

an external data splitting by user good first issue
#2902 opened Jul 16, 2024 by ori-kron-wis Loading… scvi-tools 1.2
3
@ori-kron-wis
15
refactor(model): refactor out common minified mode methods cuda tests Run test suite on CUDA
#2883 opened Jul 3, 2024 by martinkim0 Loading…
2
style: add initial tensor shape typing to vae
#2868 opened Jun 28, 2024 by martinkim0 Loading…
1
@canergen
2
fix(module): address shape mismatch for scanvae loss n_samples
#2867 opened Jun 28, 2024 by martinkim0 Loading…
1
feat: support numpy 2.0 on-merge: backport to 1.1.x on-merge: backport to 1.1.x
#2842 opened Jun 17, 2024 by martinkim0 Loading…
1
2
feat(external): implement METHLYVI for scBS-seq data cuda tests Run test suite on CUDA
#2834 opened Jun 10, 2024 by ethanweinberger Loading… scvi-tools 1.2
@martinkim0
28
compute DE+ and DE- separately P0
#2826 opened Jun 3, 2024 by LevyNat Loading…
3
Fix for get_normalized_expression P0
#2805 opened May 17, 2024 by lauradmartens Loading…
1
Poissonmultivi P2
#2735 opened Apr 18, 2024 by lauradmartens Loading…
@martinkim0
2
Fixes to pyro model initialisation & sampling [WIP] P1
#2695 opened Apr 7, 2024 by vitkl Loading…
@martinkim0
5
Update _trainingplans.py P0
#2632 opened Mar 26, 2024 by canergen Loading…
1
2
Adding model with cycle consistency and VampPrior cuda tests Run test suite on CUDA P1
#2421 opened Jan 19, 2024 by Hrovatin Loading…
1
55
Can hub paper P0
#2379 opened Jan 5, 2024 by canergen Loading…
3 of 4 tasks
9
Fixes error in get losses functions
#2362 opened Dec 8, 2023 by canergen Loading…
5 of 6 tasks
7
Library size estimation: changing prior variance and n_hidden P2
#1957 opened Mar 14, 2023 by vitkl Loading…
2
DestVI changed l1 loss. Expected proportions
#1591 opened Jul 3, 2022 by canergen • Draft
@justjhong @romain-lopez
5
ProTip! What’s not been updated in a month: updated:<2024-06-16.